BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G07SP1|AL425758
(745 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1569 1440 0.0
>3x_Contig1569
Length = 11625
Score = 1440 bits (725), Expect = 0.0
Identities = 739/745 (99%)
Strand = Plus / Minus
Query: 1 gatccagcaagtctcaatggcgagttgttttattagtgaagaaagtttattgtacaacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4502 gatccagcaagtctcaatggcgagttgttttattagtgaagaaagtttattgtacaacgt 4443
Query: 61 tggttcagggtctgataatgaggctgttaatatcaccgtccagaatagaagctgcgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4442 tggttcagggtctgataatgaggctgttaatatcaccgtccagaatagaagctgcgactg 4383
Query: 121 agaatatagctcagttgccgaatttgattgcattatgggaaagtatggtaaaaatctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382 agaatatagctcagttgccgaatttgattgcattatgggaaagtatggtaaaaatctggc 4323
Query: 181 gacaaaaatgttgtgtaactcagtggctttttcaatagaaatgtggacatcacccaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4322 gacaaaaatgttgtgtaactcagtggctttttcaatagaaatgtggacatcacccaagac 4263
Query: 241 aaactcgtcgatattagcgtgaggagatggcaacaacggcattgcattagtcgttgcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4262 aaactcgtcgatattagcgtgaggagatggcaacaacggcattgcattagtcgttgcaac 4203
Query: 301 aacatgttgtttgcttgaagaaagatcattagcaggtgaatgacccgtagttgttggact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4202 aacatgttgtttgcttgaagaaagatcattagcaggtgaatgacccgtagttgttggact 4143
Query: 361 actattctgaggtgaactggaagaaatttgttgacttaggcgtttcagagcgatctgcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4142 actattctgaggtgaactggaagaaatttgttgacttaggcgtttcagagcgatctgcaa 4083
Query: 421 aacaggagggaaaaagtctttagwatttgcaggtactgaatcattcaacaactgcggttt 480
||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4082 aactggagggagacggtctttagtatttgcaggtactgaatcattcaacaactgcggttt 4023
Query: 481 accgctgcttagactgccaccattatgactggcaggagaatgatcagatcctgtgggtgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4022 accgctgcttagactgccaccattatgactggcaggagaatgatcagatcctgtgggtgt 3963
Query: 541 daccactttggaatttgaggacgtggttggatttgtagttgtggtttgagagtcttgtag 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3962 aaccactttggaatttgaggacgtggttggatttgtagttgtggtttgagagtcttgtag 3903
Query: 601 taactgtggttcattcgtaaggtaggtttgtactgaaatcttattcttcgctacttgacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3902 taactgtggttcattcgtaaggtaggtttgtactgaaatcttattcttcgctacttgacc 3843
Query: 661 ctgagtcggccctgctaccctgtatgaaaaatcaacagatttgatagcttgcaacaaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 ctgagtcggccctgctaccctgtatgaaaaatcaacagatttgatagcttgcaacaaatt 3783
Query: 721 ctgtcctatattgctttgttttaga 745
|||||||||||||||||||||||||
Sbjct: 3782 ctgtcctatattgctttgttttaga 3758
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4842
Number of Sequences: 1807
Number of extensions: 4842
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 745
length of database: 10,358,551
effective HSP length: 16
effective length of query: 729
effective length of database: 10,329,639
effective search space: 7530306831
effective search space used: 7530306831
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)